Runs with illumina total RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices. RNA-Seq is a bioinformatics analysis pipeline used for RNA sequencing data. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner.
Education that enables the science of the future Courses and workshops SciLifeLab offer educational courses and workshops for PhD students, postdocs, investigators and other employees within all Swedish universities. The courses and workshops cover …
Relevant previous experience in sequencing or analysis SciLife Bioinformatics: short-term support - BILS . Bioinformatics Infrastructure for Life Sciences Originally VR infrastructure . More than 40 employees around See the NBIS website for more information about bioinformatics long-term support. If you work on a project granted support, but lack an access to the wiki pages for the project, please ask your contact in the support team. Genomics, Proteomics and Systems Biology Approaches Scientific research areas for the prize awards.
The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. Introduction to Bioinformatics Using NGS Data. Held in Gothenburg May 15-19, 2017. Important Links. Pre-course material Schedule. Maps & Travel Info.
The pipeline uses Nextflow , a bioinformatics workflow tool. It pre-processes raw data from FastQ inputs, aligns the reads and performs peak calling and extensive quality-control on the results.
SciLifeLab is a national resource of unique technologies and expertise available to life scientists, closely intertwined with our community of researchers in areas such as biomedicine, ecology and evolution. We […]
BEA provides consultation services for experimental design, analysis strategy, statistical considerations, price enquire and general help to select the appropriate analysis method. Many of BEA members have long experience in SciLife Lab Stockholm; Tools of Science; Bioinformatics Infrastructure for Life Sciences(BILS) ©2009 BEA. Last Modified: October 2018 BEA offers bioinformatic support for various microarray platforms, including arrays for gene expression, miRNA expression, methylation and cytogenetics. All bioinformatic services are free of charge.
The SciLifeLab Bioinformatics platform offers a track where PhD students can get a senior bioinformatician as a personal advisor for up to two years of their PhD studies. We believe that the program will be an important part in building Swedish large-scale research competence in medicine and biology.
PubMed DOI Crossref. Improved predictions by Pcons.net using multiple SciLifeLab Bioinformatics (NBIS) and Genomics (NGI) were both top-ranked in the recent VR evaluation (September 2017). Workshops in advanced and applied bioinformatics NBIS –the Bioinformatics Platform Distributed research infrastructure with nodes at the 6 large university towns The Swedish node in ELIXIR, the European infrastructure for bioinformatics Staff: ~75 full-time equivalents Funding from: The SciLifeLab Bioinformatics platform (NBIS) organizes weekly drop-in sessions in Lund, Göteborg, Linköping, Stockholm, Uppsala, and Umeå. Bioinformatics experts are then available to discuss your bioinformatics needs, free of charge. You can find the upcoming scheduled events on the NBIS events page.
Systems Biology vid Chalmers tekniska högskola i Göteborg som kommer att ingå i plattformen Bioinformatics; Metabolomics vid Sveriges
SciLifeLab Autoimmunity and Serology profiling facility SARS-CoV-2 antibody test statistics The total number of tests run at SciLifeLab Autoimmunity and For bioinformatics support, please contact: https://nbis.se/support/
Associate Head of Department with responsibility for SciLifeLab. Arne Elofsson. Professor in Bioinformatics 08-16 10 19 arne.elofsson@dbb.su.se
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Bioinformatics 16 (6) 941-949 [2015-11-00; online 2015-03-30] Affiliated researcher.
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The multi-modality hypothesis-free biomarker discovery will use state-of-the-art analytical platforms and bioinformatics in collaboration with SciLife Lab.
functional genomics, bioinformatics, small RNA biology or related topics.